Publication
2020-2021 2019-2015 2014-2010 2009-2000 1999-1993
2022
  1. Saeko Yanaka#, Shigetaka Nishiguchi#, Rina Yogo#, Hiroki Watanabe, Jiana Shen, Hirokazu Yagi, Takayuki Uchihashi*, and Koichi Kato*, "Quantitative Visualization of the Interaction between Complement Component C1 and Immunoglobulin G: The Effect of CH1 Domain Deletion", International Journal of Molecular Sciences, 23, 2090(2022). DOI: 10.3390/ijms23042090. (#equal contribution)
  2. Kosuke Kikuchi, Tatsuya Fukuyama, Takayuki Uchihashi, Tadaomi Furuta, Yusuke T. Maeda, and Takafumi Ueno*, "Protein Needles Designed to Self-Assemble through Needle Tip Engineering", Small, 18, 2106401 (2022). DOI: 10.1002/smll.202106401
  3. Yutaro Yamashita, Shohei Tashiro*, Yoshiki Ishii,Takayuki Uchihashi, Nobuyuki Matsushita, Ryou Kubota, and Mitsuhiko Shionoya*, "Shape-selective one-step synthesis of branched gold nanoparticles on the crystal surface of redox-active PdII-macrocycles", Dalton Transactions, 51, 1318-1324(2022). DOI: 10.1039/D1DT03973C

2021
  1. Mizuki Sumikawa, Rei Abe-Yoshizumi, Takayuki Uchihashi, and Hideki Kandori*, "Molecular Origin of the Anomalous pH Effect in Blue Proteorhodopsin", Journal of Physical Chemistry Letters 12, 12225-12229 (2021). DOI: 10.1021/acs.jpclett.1c03355
  2. Masaru Yamanaka, Tsuyoshi Mashima, Michio Ogihara, Mei Okamoto, Takayuki Uchihashi, and Shun Hirota*, "Construction of ferritin hydrogels utilizing subunit–subunit interactions", PLoS ONE 16, e0259052 (2021). DOI: 10.1371/journal.pone.0259052
  3. Maho Yagi-Utsumi, Kazuhiro Aoki, Hiroki Watanabe, Chihong Song, Seiji Nishimura, Tadashi Satoh, Saeko Yanaka, Christian Ganser, Sae Tanaka, Vincent Schnapka, Ean Wai Goh, Yuji Furutani, Kazuyoshi Murata, Takayuki Uchihashi, Kazuharu Arakawa & Koichi Kato*, "Desiccation-induced fibrous condensation of CAHS protein from an anhydrobiotic tardigrade", Scientific Reports 11, 21328 (2021). DOI: 10.1038/s41598-021-00724-6
  4. Syeda Ruvaiya Nasrin#, Christian Ganser#, Seiji Nishikawa, Arif MD. Rashedul Kabir, Kazuki Sada, Takefumi Yamashita, Mitsunori Keguchi, Takayuki Uchihashi, Henry Hess, and Akira Kakugo*, "Deformation of microtubules regulates translocation dynamics of kinesin", Science Advances 7, eabf2211 (2021) (#equal contribution). DOI: 10.1126/sciadv.abf2211.
  5. Kazuhisa Miyazawa, Satoru G. Itoh, Hiroki Watanabe, Takayuki Uchihashi, Saeko Yanaka, Maho Yagi-Utsumi, Koichi Kato, Kazuharu Arakawa, and Hisashi Okumura*, "Tardigrade Secretory-Abundant Heat-Soluble Protein Has a Flexible β-Barrel Structure in Solution and Keeps This Structure in Dehydration", Journal of Physical Chemistry B, 125, 9145–9154 (2021). DOI: doi.org/10.1021/acs.jpcb.1c04850.
  6. Bhaskar Dasgupta, Osamu Miyashita, Takayuki Uchihashi and Florence Tama*, "Reconstruction of Three-Dimensional Conformations of Bacterial ClpB from High-Speed Atomic-Force-Microscopy Images", Frontiers in in Molecular Biosciences: Biological Modeling and Simulation 8, 704274 (2021). DOI: 10.3389/fmolb.2021.704274.
  7. Ayuko Sakane*, Taka-aki Yano, Takayuki Uchihashi, Kazuki Horikawa, Yusuke Hara, Issei Imoto, Shusaku Kurisu, Hiroshi Yamada, Kohji Takei and Takuya Sasaki*, "JRAB/MICAL-L2 undergoes liquid–liquid phase separation to form tubular recycling endosomes", Communications Biology 4, 551 (2021). DOI: 10.1038/s42003-021-02080-7.
  8. Yuma Sasaki, Seina Hiroshige, Masaya Takizawa, Yuichiro Nishizawa, Takayuki Uchihashi, Haruka Minato and Daisuke Suzuki*, "Non-close-packed arrangement of soft elastomer microspheres on solid substrates", RSC Advances 11, 14562-14567(2021). DOI: 10.1039/D1RA02688G.
  9. Yuichiro Nishizawa, Haruka Minato, Takumi Inui, Ikuma Saito, Takuma Kureha, Mitsuhiro Shibayama, Takayuki Uchihashi* and Daisuke Suzuki*, "Nanostructure and thermoresponsiveness of poly(N-isopropyl methacrylamide)-based hydrogel microspheres prepared via aqueous free radical precipitation polymerization", RSC Advances 11, 13130-13137(2021). DOI: 10.1039/D1RA01650D.
  10. Yuichiro Nishizawa, Haruka Minato, Takumi Inui, Takayuki Uchihashi*, Daisuke Suzuki*, “Nanostructures, Thermoresponsiveness, and Assembly Mechanism of Hydrogel Microspheres during Aqueous Free-Radical Precipitation Polymerization”, Langmuir 37 151-159 (2021). DOI: 10.1021/acs.langmuir.0c02654.
  11. Junso Fujita, Shogo Sugiyama, Haruna Terakado, Maho Miyazaki, Mayuki Ozawa, Nanami Ueda, Natsuko Kuroda, Shun-ichi Tanaka, Takuya Yoshizawa, Takayuki Uchihashi* and Hiroyoshi Matsumura*, "Dynamic Assembly/Disassembly of Staphylococcus aureus FtsZ Visualized by High-Speed Atomic Force Microscopy", International Journal of Molecular Sciences 22, 1697(2021). DOI: 10.3390/ijms22041697.

2020
  1. Basudev Maity, Zhipeng Li, Kento Niwase, Christian Ganser, Tadaomi Furuta, Takayuki Uchihashi, Diannan Lu, Takafumi Ueno*, "Single-molecule level dynamic observation of disassembly of the apo-ferritin cage in solution", Physical Chemistry Chemical Physics 22, 18562-18572 (2020). DOI: 10.1039/D0CP02069A.
  2. Hassan Hakimi, Thomas J Templeton, Miako Sakaguchi, Junya Yamagishi, Shinya Miyazaki, Kazuhide Yahata, Takayuki Uchihashi, Shin-ichiro Kawazu, Osamu Kaneko, Masahito Asada*, "Novel Babesia bovis exported proteins that modify properties of infected red blood cells", PLoS pathogens 16, e1008917 (2020). DOI: 110.1371/journal.ppat.1008917.
  3. Tatsuya Ikuta, Wataru Shihoya, Masahiro Sugiura, Kazuho Yoshida, Masahito Watari, Takaya Tokano, Keitaro Yamashita, Kota Katayama, Satoshi P. Tsunoda, Takayuki Uchihashi, Hideki Kandori* and Osamu Nureki*, "Structural insights into the mechanism of rhodopsin phosphodiesterase", Nature Communications 11,5605 (2020). DOI: 10.1038/s41467-020-19376-7.
  4. Taku Uchiyama#, Takayuki Uchihashi#, Akihiko Nakamurad, Hiroki Watanabec, Satoshi Kanekoe, Masahiro Samejimaa, and Kiyohiko Igarashi*, "Convergent evolution of processivity in bacterial and fungal cellulases", Proceedings of the National Academy of Sciences of the United States of America, 117, 19896-19903 (2020). DOI: 10.1073/pnas.2011366117. (#equal contribution)
  5. Nesreen Hamad, Hiroki Watanabe, Takayuki Uchihashi, Riki Kurokawa, Takashi Nagata, and Masato Katahira*, "Direct visualization of the conformational change of FUS/TLS upon binding to promoter-associated non-coding RNA", Chemical Communications 56, 9134-9137 (2020). DOI:10.1039/D0CC03776A.
  6. Takaya Tokano, Yuki Kato, Shogo Sugiyama, Takayuki Uchihashi*, and Takumi Noguchi*, "Structural Dynamics of a Protein Domain Relevant to the Water-Oxidizing Complex in Photosystem II as Visualized by High-Speed Atomic Force Microscopy", The Journal of Physical Chemistry B 124, 5847-5857 (2020). DOI: 10.1021/acs.jpcb.0c03892.
  7. Hiroyuki Terashima, Keiichi Hirano, Yuna Inoue, Takaya Tokano, Akihiro Kawamoto, Takayuki Kato, Erika Yamaguchi, Keiichi Namba, Takayuki Uchihashi, Seiji Kojima and Michio Homma*, "Assembly mechanism of a supramolecular MS-ring complex to initiate bacterial flagellar biogenesis in Vibrio species", Journal of Bacteriology 202, e00236-20 (2020). DOI: 10.1128/JB.00236-20.
  8. Haruka Minato, Yuichiro Nishizawa, Takayuki Uchihashi* and Disuke Suzuki*, "Thermoresponsive structural changes of single poly(N-isopropyl acrylamide) hydrogel microspheres under densely packed conditions on a solid substrate", Polymer Journal 52, 1137-1141(2020). DOI: 110.1038/s41428-020-0372-3.
  9. Keiichi Inoue*, Satoshi P. Tsunoda, Manish Singh, Sahoko Tomida, Shoko Hososhima, Masae Konno, Ryoko Nakamura, Hiroki Watanabe, Paul-Adrian Bulzu, Horia L. Banciu, Adrian-Ştefan Andrei, Takayuki Uchihashi, Rohit Ghai, Oded Béjà and Hideki Kandori*, "Schizorhodopsins: A family of rhodopsins from Asgard archaea that function as light-driven inward H+ pumps", Science Advances 6, eaaz2441 (2020). DOI: 10.1126/sciadv.aaz2441.
  10. Hiroki Konno, Takahiro Watanabe-Nakayama, Takayuki Uchihashi, Momoko Okuda, Liwen Zhu, Noriyuki Kodera, Yousuke Kikuchi, Toshio Ando and Hideki Taguchi*, "Dynamics of oligomer and amyloid fibril formation by yeast prion Sup35 observed by high-speed atomic force microscopy", Proceedings of the National Academy of Sciences of the United States of America 117, 7831-7836 (2020). DOI: 110.1073/pnas.1916452117.
  11. Takafumi Ueno*, Kento Niwase, Daisho Tsubokawa, Kosuke Kikuchi, Natsumi Takai, Tadaomi Furuta, Ryuji Kawano, Takayuki Uchihashi, "Dynamic behavior of an artificial protein needle contacting a membrane observed by high-speed atomic force microscopy", Nanoscale 12, 8166-8173 (2020). DOI: 10.1039/D0NR01121E.
  12. Takayuki Uchihashi* and Christian Ganser*, "Recent advances in bioimaging with high-speed atomic force microscopy", Biophysical Reviews12, 363-369 (2020). DOI: 10.1007/s12551-020-00670-z.
  13. Akasit Visootsat, Akihiko Nakamura Paul Vignon, Hiroki Watanabe, Takayuki Uchihashi and Ryota Iino*, "Single-molecule imaging analysis reveals the mechanism of a high-catalytic-activity mutant of chitinase A from Serratia marcescens", Journal of Biological Chemistry 295, 1915-1925 (2020). DOI: 10.1074/jbc.RA119.012078.
  14. Shota Hirayama, Koji Oohora*, Takayuki Uchihashi* and Takashi Hayashi*, "A Thermoresponsive Micellar Assembly Constructed from a Hexameric Hemoprotein Modified with Poly(N-isopropylacrylamide) toward an Artificial Light-harvesting System", Journal of American Chemical Society 142, 1822-1831 (2020). DOI: 10.1021/jacs.9b10080.
  15. Koji Oohora*, Shota Hirayama, Takayuki Uchihashi* and Takashi Hayashi*, "Construction of a Hexameric Hemoprotein Sheet and Direct Observation of Dynamic Process of its Formation", Chemistry Letters 49, 186-190 (2020). DOI: 10.1246/cl.190855.
  16. Maho Yagi-Utsumi, Arunima Sikdar, Chihong Song, Jimin Park, Rintaro Inoue, Hiroki Watanabe, Raymond N. Burton-Smith, Toshiya Kozai, Tatsuya Suzuki, Atsuji Kodama, Kentaro Ishii, Hirokazu Yagi, Tadashi Satoh, Susumu Uchiyama, Takayuki Uchihashi, Keehyoung Joo, Jooyoung Lee, Masaaki Sugiyama, Kazuyoshi Murata and Koichi Kato, "Supramolecular tholos-like architecture constituted by archaeal proteins without functional annotation", Scientific Reports10, 1540 (2020). DOI: 10.1038/s41598-020-58371-2.
  17. Hisashi Tatebe, Chew Theng Lim, Hiroki Konno, Kazuhiro Shiozaki, Akira Shinohara, Takayuki Uchihashi* and Asako Furukohri*, "Rad50 zinc hook functions as a constitutive dimerization module interchangeable with SMC hinge", Nature Communications 11, Article number: 370 (2020). DOI: 10.1038/s41467-019-14025-0.
  18. Saeko Yanaka#, Rina Yogo#, Hiroki Watanab#, Yuki Taniguchi,Tadashi Satoh, Naoko Komura, Hiromune Ando, Hirokazu Yagi, Nobuhiro Yuki, Takayuki Uchihashi*, Koichi Kato*, "On-Membrane Dynamic Interplay between Anti-GM1 IgG Antibodies and Complement Component C1q", International Journal of Molecular Sciences, 21, 147 (2020). DOI: 10.3390/ijms21010147. (#equal contribution)
  19. Takayuki Umakoshi, Shingo Fukuda, Ryota Iino, Takayuki Uchihashi and Toshio Ando*, "High-speed near-field fluorescence microscopy combined with high-speed atomic force microscopy for biological studies", Biochimica et Biophysica Acta (BBA) - General Subjects 1864, 129325 (2020), DOI: 10.1016/j.bbagen.2019.03.011.